BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H03SP1|AL430449
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1306 1710 0.0
>3x_Contig1306
Length = 6696
Score = 1710 bits (862), Expect = 0.0
Identities = 873/876 (99%), Gaps = 1/876 (0%)
Strand = Plus / Plus
Query: 9 tctgcttcgtcgttgcaagagatctcgagcatcacaacgcagtkaaaattcggttatcat 68
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 5137 tctgcttcgtcgttgcaagagatctcgagcatcacaacgcagttgaa-ttcggttatcat 5195
Query: 69 gaacaataccaagatttttgtagagagttcgggttttgtacagttggaaccgttcatcag 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5196 gaacaataccaagatttttgtagagagttcgggttttgtacagttggaaccgttcatcag 5255
Query: 129 gatgtcggtatcctctccgcaagtgaaagttttctcattgatatcggattatgacatcag 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5256 gatgtcggtatcctctccgcaagtgaaagttttctcattgatatcggattatgacatcag 5315
Query: 189 ggctgtggcatcaaaccggtacgttcaattcaacggtggtaataagtccaagaagcaaac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5316 ggctgtggcatcaaaccggtacgttcaattcaacggtggtaataagtccaagaagcaaac 5375
Query: 249 gattttcattggtgagacagggtctttgaagacccaatcggcttcaaactcatacccaaa 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5376 gattttcattggtgagacagggtctttgaagacccaatcggcttcaaactcatacccaaa 5435
Query: 309 acagatttctagtttgttaactacgttccattcactattcttgaaattgttccccgacga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5436 acagatttctagtttgttaactacgttccattcactattcttgaaattgttccccgacga 5495
Query: 369 tgccatagatacttgcaatttttcaccgttagatttcttgacacagcaatggaagttggc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5496 tgccatagatacttgcaatttttcaccgttagatttcttgacacagcaatggaagttggc 5555
Query: 429 tatcccaagggtatgtttcgatccactattggttcttttcgaagagtttgttccaaagcg 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5556 tatcccaagggtatgtttcgatccactattggttcttttcgaagagtttgttccaaagcg 5615
Query: 489 attacatcaacaaatcttggccaagcctttgatctcgggtctcgttactgagataatcac 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5616 attacatcaacaaatcttggccaagcctttgatctcgggtctcgttactgagataatcac 5675
Query: 549 gttgactagaaccatgggtgctagattgccttccggttacgatacagaaagcgatctttt 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5676 gttgactagaaccatgggtgctagattgccttccggttacgatacagaaagcgatctttt 5735
Query: 609 ggaaagatgggtcgcggataatggtgaaaacaactacccctcgttgttgtaccatttcga 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5736 ggaaagatgggtcgcggataatggtgaaaacaactacccctcgttgttgtaccatttcga 5795
Query: 669 acatagatctgcaccactagatatagatttgttattgctacaaccgatcttactggcgga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5796 acatagatctgcaccactagatatagatttgttattgctacaaccgatcttactggcgga 5855
Query: 729 tgattttacgataaagacaccctatttggagttcttatactctatgatgtgtcaattcaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5856 tgattttacgataaagacaccctatttggagttcttatactctatgatgtgtcaattcaa 5915
Query: 789 gaaattgaacaatgatgaatctaaattgtttacaagatctgataaagtatccaagttaag 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5916 gaaattgaacaatgatgaatctaaattgtttacaagatctgataaagtatccaagttaag 5975
Query: 849 agatgaactcggtcaactatcgttgctcaaggggac 884
||||||||||||||||||||||||||||||||||||
Sbjct: 5976 agatgaactcggtcaactatcgttgctcaaggggac 6011
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6589
Number of Sequences: 1807
Number of extensions: 6589
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)